I see what you are saying, with a package file list the sce would be mounted, copied to a read/write directory (same as merging but much faster), then the files in the package to be updated would have the old files removed and the new ones copied over in their place. I will put it on the list of things to look in to, as I use large sce's of 500mb or more, would make updating a package within it much much faster.